Teaching Resources

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Teaching Resources

Post by danfdeblasio » Wed May 06, 2015 3:16 pm

I frequently find myself having to explain algorithms to biologists. Sometimes this means quickly (like in an hour or two) putting together a talk or lecture walking people through what are sometimes difficult concepts quickly and at a high level. I have a couple go to articles that I have found (and if I could remember where I have that list I will post more) but this is one I have found recently that is a really elegant explanation of partial order graphs for multiple sequence alignment a close enough to what I do people assume I am an expert but just far enough away I can't always explain it perfectly on the fly.

http://simpsonlab.github.io/2015/05/01/ ... nding-poa/

It would be really cool if anyone else has found any really quick and easy resources like this that we can use to teach others when we inevitably have to.
Dan DeBlasio
ISCB-SC Representative to the ISCB Board of Directors.
ISCB-SC Web Committee, Member
Computational Biology Department
Carnegie Mellon University
Pittsburgh, PA, USA

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Re: Teaching Resources

Post by pmeysman » Fri May 08, 2015 8:41 am

For organising practical session on machine learning/data mining, I've found this website to be invaluable:

It contains a large number of data sets that can be immediately used for teaching purposes (including several biological ones).
Pieter Meysman
Former SC Chair (2015-2016)
Postdoc @ University of Antwerp, Belgium

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